Construct: shRNA TRCN0000022951

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_126274.4-606s1c1
DNA Barcode:
CCTCTTTATTATGTGTAGCTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
BC030499 (216976)
Gene Description:
cDNA sequence BC030499
Transcript:
RefSeq XM_126274.4 (NON-CURRENT)
Match location:
Position 606 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000022951)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCTTTATTATGTGTAGCTA
Hairpin Sequence:
5'-CCGG-CCTCTTTATTATGTGTAGCTA-CTCGAG-TAGCTACACATAATAAAGAGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCTTTATTATGTGTAGCTACTCGAGTAGCTACACATAATAAAGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCTTTATTATGTGTAGCTACTCGAGTAGCTACACATAATAAAGAGG-3'

Other clones with same target sequence:

(none)