Construct: shRNA TRCN0000023551

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_022563.1-2387s1c1
DNA Barcode:
CCAAACATCATCCGTCTCTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ddr2 (18214)
Gene Description:
discoidin domain receptor family, member 2
Transcript:
RefSeq NM_022563.1 (NON-CURRENT)
Match location:
Position 2387 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000023551)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAAACATCATCCGTCTCTTA
Hairpin Sequence:
5'-CCGG-CCAAACATCATCCGTCTCTTA-CTCGAG-TAAGAGACGGATGATGTTTGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAAACATCATCCGTCTCTTACTCGAGTAAGAGACGGATGATGTTTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAAACATCATCCGTCTCTTACTCGAGTAAGAGACGGATGATGTTTGG-3'

Other clones with same target sequence:

(none)