Construct: shRNA TRCN0000023561

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007936.2-552s1c1
DNA Barcode:
CCACTGAGCAAGAAAGGGTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Epha4 (13838)
Gene Description:
Eph receptor A4
Transcript:
RefSeq NM_007936.2 (NON-CURRENT)
Match location:
Position 552 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000023561)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCACTGAGCAAGAAAGGGTTT
Hairpin Sequence:
5'-CCGG-CCACTGAGCAAGAAAGGGTTT-CTCGAG-AAACCCTTTCTTGCTCAGTGG-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCACTGAGCAAGAAAGGGTTTCTCGAGAAACCCTTTCTTGCTCAGTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCACTGAGCAAGAAAGGGTTTCTCGAGAAACCCTTTCTTGCTCAGTGG-3'

Other clones with same target sequence:

(none)