Construct: shRNA TRCN0000026280
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_008314.1-1471s1c1
- DNA Barcode:
- CCTGTGGTTGGGCTATTCTAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Htr5a (15563)
- Gene Description:
- 5-hydroxytryptamine (serotonin) receptor 5A
- Transcript:
- RefSeq NM_008314.1 (NON-CURRENT)
- Match location:
- Position 1471 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000026280)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCTGTGGTTGGGCTATTCTAA
- Hairpin Sequence:
-
5'-CCGG-CCTGTGGTTGGGCTATTCTAA-CTCGAG-TTAGAATAGCCCAACCACAGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCTGTGGTTGGGCTATTCTAACTCGAGTTAGAATAGCCCAACCACAGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCTGTGGTTGGGCTATTCTAACTCGAGTTAGAATAGCCCAACCACAGG-3'
Other clones with same target sequence:
(none)
