Construct: shRNA TRCN0000027440

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_141500.1-1118s1c1
DNA Barcode:
GTCAGAAGTGTGTTGCCTATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Chrm5 (213788)
Gene Description:
cholinergic receptor, muscarinic 5
Transcript:
RefSeq XM_141500.1 (NON-CURRENT)
Match location:
Position 1118 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000027440)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTCAGAAGTGTGTTGCCTATA
Hairpin Sequence:
5'-CCGG-GTCAGAAGTGTGTTGCCTATA-CTCGAG-TATAGGCAACACACTTCTGAC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTCAGAAGTGTGTTGCCTATACTCGAGTATAGGCAACACACTTCTGACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTCAGAAGTGTGTTGCCTATACTCGAGTATAGGCAACACACTTCTGAC-3'

Other clones with same target sequence:

(none)