Construct: shRNA TRCN0000027733
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- XM_126670.3-2367s1c1
- DNA Barcode:
- CCAGAAACTCATTGGCGTCAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Unc13d (70450)
- Gene Description:
- unc-13 homolog D (C. elegans)
- Transcript:
- RefSeq XM_126670.3 (NON-CURRENT)
- Match location:
- Position 2367 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000027733)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGAAACTCATTGGCGTCAA
- Hairpin Sequence:
-
5'-CCGG-CCAGAAACTCATTGGCGTCAA-CTCGAG-TTGACGCCAATGAGTTTCTGG-TTTTT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGAAACTCATTGGCGTCAACTCGAGTTGACGCCAATGAGTTTCTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGAAACTCATTGGCGTCAACTCGAGTTGACGCCAATGAGTTTCTGG-3'
Other clones with same target sequence:
(none)
