Construct: shRNA TRCN0000030088

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_023587.1-261s1c1
DNA Barcode:
GCTACCATAGCCTTTATTATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hacd2 (70757)
Gene Description:
3-hydroxyacyl-CoA dehydratase 2
Transcript:
RefSeq NM_023587.1 (NON-CURRENT)
Match location:
Position 261 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000030088)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTACCATAGCCTTTATTATT
Hairpin Sequence:
5'-CCGG-GCTACCATAGCCTTTATTATT-CTCGAG-AATAATAAAGGCTATGGTAGC-TTTTT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTACCATAGCCTTTATTATTCTCGAGAATAATAAAGGCTATGGTAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTACCATAGCCTTTATTATTCTCGAGAATAATAAAGGCTATGGTAGC-3'

Other clones with same target sequence:

(none)