Construct: shRNA TRCN0000031270

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008609.2-340s1c1
DNA Barcode:
GCCGAGATGCAGAGTTTCTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Mmp15 (17388)
Gene Description:
matrix metallopeptidase 15
Transcript:
RefSeq NM_008609.2 (NON-CURRENT)
Match location:
Position 340 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000031270)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCGAGATGCAGAGTTTCTAT
Hairpin Sequence:
5'-CCGG-GCCGAGATGCAGAGTTTCTAT-CTCGAG-ATAGAAACTCTGCATCTCGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCGAGATGCAGAGTTTCTATCTCGAGATAGAAACTCTGCATCTCGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCGAGATGCAGAGTTTCTATCTCGAGATAGAAACTCTGCATCTCGGC-3'

Other clones with same target sequence:

(none)