Construct: shRNA TRCN0000031538

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_030127.1-1130s1c1
DNA Barcode:
CCATCATCAATTACGGGAACT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Htra3 (78558)
Gene Description:
HtrA serine peptidase 3
Transcript:
RefSeq NM_030127.1 (NON-CURRENT)
Match location:
Position 1130 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000031538)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATCATCAATTACGGGAACT
Hairpin Sequence:
5'-CCGG-CCATCATCAATTACGGGAACT-CTCGAG-AGTTCCCGTAATTGATGATGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATCATCAATTACGGGAACTCTCGAGAGTTCCCGTAATTGATGATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATCATCAATTACGGGAACTCTCGAGAGTTCCCGTAATTGATGATGG-3'

Other clones with same target sequence:

(none)