Construct: shRNA TRCN0000032837

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019724.2-469s1c1
DNA Barcode:
GCAGCAGTTCTATGGCATTAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Mmp16 (17389)
Gene Description:
matrix metallopeptidase 16
Transcript:
RefSeq NM_019724.2 (NON-CURRENT)
Match location:
Position 469 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000032837)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGCAGTTCTATGGCATTAA
Hairpin Sequence:
5'-CCGG-GCAGCAGTTCTATGGCATTAA-CTCGAG-TTAATGCCATAGAACTGCTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGCAGTTCTATGGCATTAACTCGAGTTAATGCCATAGAACTGCTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGCAGTTCTATGGCATTAACTCGAGTTAATGCCATAGAACTGCTGC-3'

Other clones with same target sequence:

(none)