Construct: shRNA TRCN0000034901

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_012126.1-625s1c1
DNA Barcode:
CGACCTGATGCGCTCTATCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CHST5 (23563)
Gene Description:
carbohydrate sulfotransferase 5
Transcript:
RefSeq NM_012126.1 (NON-CURRENT)
Match location:
Position 625 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000034901)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGACCTGATGCGCTCTATCTT
Hairpin Sequence:
5'-CCGG-CGACCTGATGCGCTCTATCTT-CTCGAG-AAGATAGAGCGCATCAGGTCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGACCTGATGCGCTCTATCTTCTCGAGAAGATAGAGCGCATCAGGTCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGACCTGATGCGCTCTATCTTCTCGAGAAGATAGAGCGCATCAGGTCG-3'

Other clones with same target sequence:

(none)