Construct: shRNA TRCN0000035247

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_020469.1-564s1c1
DNA Barcode:
CATGGAGATGATCAGTGACTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ABO (28)
Gene Description:
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
Transcript:
RefSeq NM_020469.1 (NON-CURRENT)
Match location:
Position 564 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000035247)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATGGAGATGATCAGTGACTT
Hairpin Sequence:
5'-CCGG-CATGGAGATGATCAGTGACTT-CTCGAG-AAGTCACTGATCATCTCCATG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATGGAGATGATCAGTGACTTCTCGAGAAGTCACTGATCATCTCCATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATGGAGATGATCAGTGACTTCTCGAGAAGTCACTGATCATCTCCATG-3'

Other clones with same target sequence:

(none)