Construct: shRNA TRCN0000038689

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_006207.1-893s1c1
DNA Barcode:
GCTTCTTCAAACAAAGTGAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PDGFRL (5157)
Gene Description:
platelet derived growth factor receptor like
Transcript:
RefSeq NM_006207.1 (NON-CURRENT)
Match location:
Position 893 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000038689)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTTCTTCAAACAAAGTGAAA
Hairpin Sequence:
5'-CCGG-GCTTCTTCAAACAAAGTGAAA-CTCGAG-TTTCACTTTGTTTGAAGAAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTTCTTCAAACAAAGTGAAACTCGAGTTTCACTTTGTTTGAAGAAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTTCTTCAAACAAAGTGAAACTCGAGTTTCACTTTGTTTGAAGAAGC-3'

Other clones with same target sequence:

  1. TRCN0000298917