Construct: shRNA TRCN0000039018

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007727.1-828s1c1
DNA Barcode:
CGGCAATCTCTACATCGCAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cntn1 (12805)
Gene Description:
contactin 1
Transcript:
RefSeq NM_007727.1 (NON-CURRENT)
Match location:
Position 828 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000039018)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGCAATCTCTACATCGCAAA
Hairpin Sequence:
5'-CCGG-CGGCAATCTCTACATCGCAAA-CTCGAG-TTTGCGATGTAGAGATTGCCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGCAATCTCTACATCGCAAACTCGAGTTTGCGATGTAGAGATTGCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGCAATCTCTACATCGCAAACTCGAGTTTGCGATGTAGAGATTGCCG-3'

Other clones with same target sequence:

(none)