Construct: shRNA TRCN0000040671

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_357023.1-865s1c1
DNA Barcode:
ACTGTGGAAATGGGCTATGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
LOC383385 (383385)
Gene Description:
similar to ubiquitin-protein ligase NEDD4-like; neural precursor cell expressed, developmentally down-regulated gene 4-like; potential epithelial sodium channel regulator; homolog of yeast ubiquitin-protein ligase Rsp5
Transcript:
RefSeq XM_357023.1 (NON-CURRENT)
Match location:
Position 865 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000040671)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ACTGTGGAAATGGGCTATGAA
Hairpin Sequence:
5'-CCGG-ACTGTGGAAATGGGCTATGAA-CTCGAG-TTCATAGCCCATTTCCACAGT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGACTGTGGAAATGGGCTATGAACTCGAGTTCATAGCCCATTTCCACAGTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAACTGTGGAAATGGGCTATGAACTCGAGTTCATAGCCCATTTCCACAGT-3'

Other clones with same target sequence:

(none)