Construct: shRNA TRCN0000040733

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009424.2-2478s1c1
DNA Barcode:
CCTGTGAATTTCAGAGGCTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Traf6 (22034)
Gene Description:
TNF receptor-associated factor 6
Transcript:
RefSeq NM_009424.2 (NON-CURRENT)
Match location:
Position 2478 (3UTR)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000040733)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGTGAATTTCAGAGGCTTT
Hairpin Sequence:
5'-CCGG-CCTGTGAATTTCAGAGGCTTT-CTCGAG-AAAGCCTCTGAAATTCACAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGTGAATTTCAGAGGCTTTCTCGAGAAAGCCTCTGAAATTCACAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGTGAATTTCAGAGGCTTTCTCGAGAAAGCCTCTGAAATTCACAGG-3'

Other clones with same target sequence:

(none)