Construct: shRNA TRCN0000040859

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_027315.2-1041s1c1
DNA Barcode:
CCTACTTAACTTCTCCTTTAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ube2q1 (70093)
Gene Description:
ubiquitin-conjugating enzyme E2Q family member 1
Transcript:
RefSeq NM_027315.2 (NON-CURRENT)
Match location:
Position 1041 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000040859)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTACTTAACTTCTCCTTTAA
Hairpin Sequence:
5'-CCGG-CCTACTTAACTTCTCCTTTAA-CTCGAG-TTAAAGGAGAAGTTAAGTAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTACTTAACTTCTCCTTTAACTCGAGTTAAAGGAGAAGTTAAGTAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTACTTAACTTCTCCTTTAACTCGAGTTAAAGGAGAAGTTAAGTAGG-3'

Other clones with same target sequence:

(none)