Construct: shRNA TRCN0000041801

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001001303.1-997s1c1
DNA Barcode:
CAATGAATACGGCTACAGCAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Gapdh (407972)
Gene Description:
glyceraldehyde-3-phosphate dehydrogenase
Transcript:
RefSeq NM_001001303.1 (NON-CURRENT)
Match location:
Position 997 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000041801)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAATGAATACGGCTACAGCAA
Hairpin Sequence:
5'-CCGG-CAATGAATACGGCTACAGCAA-CTCGAG-TTGCTGTAGCCGTATTCATTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAATGAATACGGCTACAGCAACTCGAGTTGCTGTAGCCGTATTCATTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAATGAATACGGCTACAGCAACTCGAGTTGCTGTAGCCGTATTCATTG-3'

Other clones with same target sequence:

(none)