Construct: shRNA TRCN0000041844

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_010887.1-430s1c1
DNA Barcode:
GAAGAGAAGAAGGTTCCGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ndufs4 (17993)
Gene Description:
NADH dehydrogenase (ubiquinone) Fe-S protein 4
Transcript:
RefSeq NM_010887.1 (NON-CURRENT)
Match location:
Position 430 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000041844)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAAGAGAAGAAGGTTCCGAAA
Hairpin Sequence:
5'-CCGG-GAAGAGAAGAAGGTTCCGAAA-CTCGAG-TTTCGGAACCTTCTTCTCTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAAGAGAAGAAGGTTCCGAAACTCGAGTTTCGGAACCTTCTTCTCTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAAGAGAAGAAGGTTCCGAAACTCGAGTTTCGGAACCTTCTTCTCTTC-3'

Other clones with same target sequence:

  1. TRCN0000349413