Construct: shRNA TRCN0000041977
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_153133.1-833s1c1
- DNA Barcode:
- CGAATTGGACAAGAGGTGCAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Rdh9 (103142)
- Gene Description:
- retinol dehydrogenase 9
- Transcript:
- RefSeq NM_153133.1 (NON-CURRENT)
- Match location:
- Position 833 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000041977)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CGAATTGGACAAGAGGTGCAA
- Hairpin Sequence:
-
5'-CCGG-CGAATTGGACAAGAGGTGCAA-CTCGAG-TTGCACCTCTTGTCCAATTCG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCGAATTGGACAAGAGGTGCAACTCGAGTTGCACCTCTTGTCCAATTCGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACGAATTGGACAAGAGGTGCAACTCGAGTTGCACCTCTTGTCCAATTCG-3'
Other clones with same target sequence:
(none)
