Construct: shRNA TRCN0000042185

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009658.2-888s1c1
DNA Barcode:
GCTGAGAACTTGAAGGTCTTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Akr1b3 (11677)
Gene Description:
aldo-keto reductase family 1, member B3 (aldose reductase)
Transcript:
RefSeq NM_009658.2 (NON-CURRENT)
Match location:
Position 888 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000042185)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGAGAACTTGAAGGTCTTT
Hairpin Sequence:
5'-CCGG-GCTGAGAACTTGAAGGTCTTT-CTCGAG-AAAGACCTTCAAGTTCTCAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGAGAACTTGAAGGTCTTTCTCGAGAAAGACCTTCAAGTTCTCAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGAGAACTTGAAGGTCTTTCTCGAGAAAGACCTTCAAGTTCTCAGC-3'

Other clones with same target sequence:

  1. TRCN0000325368