Construct: shRNA TRCN0000042322

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021473.2-1003s1c1
DNA Barcode:
GCTTGAAGAACCAGTAGTCTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Akr1a1 (58810)
Gene Description:
aldo-keto reductase family 1, member A1 (aldehyde reductase)
Transcript:
RefSeq NM_021473.2 (NON-CURRENT)
Match location:
Position 1003 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000042322)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTTGAAGAACCAGTAGTCTT
Hairpin Sequence:
5'-CCGG-GCTTGAAGAACCAGTAGTCTT-CTCGAG-AAGACTACTGGTTCTTCAAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTTGAAGAACCAGTAGTCTTCTCGAGAAGACTACTGGTTCTTCAAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTTGAAGAACCAGTAGTCTTCTCGAGAAGACTACTGGTTCTTCAAGC-3'

Other clones with same target sequence:

  1. TRCN0000349272