Construct: shRNA TRCN0000042735

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011684.1-1763s1c1
DNA Barcode:
CAACATCTTACTCTATCCATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Vmn1r45 (22297)
Gene Description:
vomeronasal 1 receptor 45
Transcript:
RefSeq NM_011684.1 (NON-CURRENT)
Match location:
Position 1763 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000042735)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAACATCTTACTCTATCCATA
Hairpin Sequence:
5'-CCGG-CAACATCTTACTCTATCCATA-CTCGAG-TATGGATAGAGTAAGATGTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAACATCTTACTCTATCCATACTCGAGTATGGATAGAGTAAGATGTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAACATCTTACTCTATCCATACTCGAGTATGGATAGAGTAAGATGTTG-3'

Other clones with same target sequence:

(none)