Construct: shRNA TRCN0000042853

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005629.1-1945s1c1
DNA Barcode:
CCTACTACTTCCGTTTCCAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SLC6A8 (6535)
Gene Description:
solute carrier family 6 member 8
Transcript:
RefSeq NM_005629.1 (NON-CURRENT)
Match location:
Position 1945 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000042853)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTACTACTTCCGTTTCCAAA
Hairpin Sequence:
5'-CCGG-CCTACTACTTCCGTTTCCAAA-CTCGAG-TTTGGAAACGGAAGTAGTAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTACTACTTCCGTTTCCAAACTCGAGTTTGGAAACGGAAGTAGTAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTACTACTTCCGTTTCCAAACTCGAGTTTGGAAACGGAAGTAGTAGG-3'

Other clones with same target sequence:

(none)