Construct: shRNA TRCN0000043449

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005174.1-447s1c1
DNA Barcode:
GCATACTTTATAGGACTCATT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ATP5F1C (509)
Gene Description:
ATP synthase F1 subunit gamma
Transcript:
RefSeq NM_005174.1 (NON-CURRENT)
Match location:
Position 447 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000043449)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCATACTTTATAGGACTCATT
Hairpin Sequence:
5'-CCGG-GCATACTTTATAGGACTCATT-CTCGAG-AATGAGTCCTATAAAGTATGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCATACTTTATAGGACTCATTCTCGAGAATGAGTCCTATAAAGTATGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCATACTTTATAGGACTCATTCTCGAGAATGAGTCCTATAAAGTATGC-3'

Other clones with same target sequence:

  1. TRCN0000290957