Construct: shRNA TRCN0000044386

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021007.1-3187s1c1
DNA Barcode:
GCCTTTGTTAGGAAGCAGAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SCN2A (6326)
Gene Description:
sodium voltage-gated channel alpha subunit 2
Transcript:
RefSeq NM_021007.1 (NON-CURRENT)
Match location:
Position 3187 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000044386)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTTGTTAGGAAGCAGAAA
Hairpin Sequence:
5'-CCGG-GCCTTTGTTAGGAAGCAGAAA-CTCGAG-TTTCTGCTTCCTAACAAAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTTGTTAGGAAGCAGAAACTCGAGTTTCTGCTTCCTAACAAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTTGTTAGGAAGCAGAAACTCGAGTTTCTGCTTCCTAACAAAGGC-3'

Other clones with same target sequence:

(none)