Construct: shRNA TRCN0000044722

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000721.1-3042s1c1
DNA Barcode:
CCAGGATTTAAGGAGGACCAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CACNA1E (777)
Gene Description:
calcium voltage-gated channel subunit alpha1 E
Transcript:
RefSeq NM_000721.1 (NON-CURRENT)
Match location:
Position 3042 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000044722)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGGATTTAAGGAGGACCAA
Hairpin Sequence:
5'-CCGG-CCAGGATTTAAGGAGGACCAA-CTCGAG-TTGGTCCTCCTTAAATCCTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGGATTTAAGGAGGACCAACTCGAGTTGGTCCTCCTTAAATCCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGGATTTAAGGAGGACCAACTCGAGTTGGTCCTCCTTAAATCCTGG-3'

Other clones with same target sequence:

(none)