Construct: shRNA TRCN0000047465

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014784.2-3311s1c1
DNA Barcode:
CCTGATCTTCTACCAGCGAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ARHGEF11 (9826)
Gene Description:
Rho guanine nucleotide exchange factor 11
Transcript:
RefSeq NM_014784.2 (NON-CURRENT)
Match location:
Position 3311 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000047465)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGATCTTCTACCAGCGAAT
Hairpin Sequence:
5'-CCGG-CCTGATCTTCTACCAGCGAAT-CTCGAG-ATTCGCTGGTAGAAGATCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGATCTTCTACCAGCGAATCTCGAGATTCGCTGGTAGAAGATCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGATCTTCTACCAGCGAATCTCGAGATTCGCTGGTAGAAGATCAGG-3'

Other clones with same target sequence:

  1. TRCN0000298862