Construct: shRNA TRCN0000047810

Construct Description:

Construct Type:
shRNA
Other Identifiers:
XM_496999.1-879s1c1
DNA Barcode:
CTATGAGATTTACCGGGATTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ARHGAP39 (80728)
Gene Description:
Rho GTPase activating protein 39
Transcript:
RefSeq XM_496999.1 (NON-CURRENT)
Match location:
Position 879 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000047810)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTATGAGATTTACCGGGATTA
Hairpin Sequence:
5'-CCGG-CTATGAGATTTACCGGGATTA-CTCGAG-TAATCCCGGTAAATCTCATAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTATGAGATTTACCGGGATTACTCGAGTAATCCCGGTAAATCTCATAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTATGAGATTTACCGGGATTACTCGAGTAATCCCGGTAAATCTCATAG-3'

Other clones with same target sequence:

(none)