Construct: shRNA TRCN0000047836

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_015242.2-852s1c1
DNA Barcode:
CCGCAGGGATCTTACATCTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ARAP1 (116985)
Gene Description:
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Transcript:
RefSeq NM_015242.2 (NON-CURRENT)
Match location:
Position 852 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000047836)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGCAGGGATCTTACATCTAT
Hairpin Sequence:
5'-CCGG-CCGCAGGGATCTTACATCTAT-CTCGAG-ATAGATGTAAGATCCCTGCGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGCAGGGATCTTACATCTATCTCGAGATAGATGTAAGATCCCTGCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGCAGGGATCTTACATCTATCTCGAGATAGATGTAAGATCCCTGCGG-3'

Other clones with same target sequence:

(none)