Construct: shRNA TRCN0000048060

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001177.3-643s1c1
DNA Barcode:
GCCTTGATGAGGCAATGGAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ARL1 (400)
Gene Description:
ADP ribosylation factor like GTPase 1
Transcript:
RefSeq NM_001177.3 (NON-CURRENT)
Match location:
Position 643 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000048060)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTGATGAGGCAATGGAAT
Hairpin Sequence:
5'-CCGG-GCCTTGATGAGGCAATGGAAT-CTCGAG-ATTCCATTGCCTCATCAAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTGATGAGGCAATGGAATCTCGAGATTCCATTGCCTCATCAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTGATGAGGCAATGGAATCTCGAGATTCCATTGCCTCATCAAGGC-3'

Other clones with same target sequence:

  1. TRCN0000300249