Construct: shRNA TRCN0000050377

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003898.1-2415s1c1
DNA Barcode:
CCCACCTACAAGTATGACGTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SYNJ2 (8871)
Gene Description:
synaptojanin 2
Transcript:
RefSeq NM_003898.1 (NON-CURRENT)
Match location:
Position 2415 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000050377)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCACCTACAAGTATGACGTT
Hairpin Sequence:
5'-CCGG-CCCACCTACAAGTATGACGTT-CTCGAG-AACGTCATACTTGTAGGTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCACCTACAAGTATGACGTTCTCGAGAACGTCATACTTGTAGGTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCACCTACAAGTATGACGTTCTCGAGAACGTCATACTTGTAGGTGGG-3'

Other clones with same target sequence:

(none)