Construct: shRNA TRCN0000050626

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003069.2-1703s1c1
DNA Barcode:
CCGCATGAAGAAAGAGAGGAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SMARCA1 (6594)
Gene Description:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Transcript:
RefSeq NM_003069.2 (NON-CURRENT)
Match location:
Position 1703 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000050626)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGCATGAAGAAAGAGAGGAT
Hairpin Sequence:
5'-CCGG-CCGCATGAAGAAAGAGAGGAT-CTCGAG-ATCCTCTCTTTCTTCATGCGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGCATGAAGAAAGAGAGGATCTCGAGATCCTCTCTTTCTTCATGCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGCATGAAGAAAGAGAGGATCTCGAGATCCTCTCTTTCTTCATGCGG-3'

Other clones with same target sequence:

(none)