Construct: shRNA TRCN0000052238

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014889.2-2698s1c1
DNA Barcode:
GCACGTTTGATGACTGCCAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PITRM1 (10531)
Gene Description:
pitrilysin metallopeptidase 1
Transcript:
RefSeq NM_014889.2 (NON-CURRENT)
Match location:
Position 2698 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000052238)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCACGTTTGATGACTGCCAAA
Hairpin Sequence:
5'-CCGG-GCACGTTTGATGACTGCCAAA-CTCGAG-TTTGGCAGTCATCAAACGTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCACGTTTGATGACTGCCAAACTCGAGTTTGGCAGTCATCAAACGTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCACGTTTGATGACTGCCAAACTCGAGTTTGGCAGTCATCAAACGTGC-3'

Other clones with same target sequence:

  1. TRCN0000288804