Construct: shRNA TRCN0000053587

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_022047.2-1833s1c1
DNA Barcode:
CAACAGCAATGAGCAGCAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DEF6 (50619)
Gene Description:
DEF6 guanine nucleotide exchange factor
Transcript:
RefSeq NM_022047.2 (NON-CURRENT)
Match location:
Position 1833 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000053587)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAACAGCAATGAGCAGCAGAA
Hairpin Sequence:
5'-CCGG-CAACAGCAATGAGCAGCAGAA-CTCGAG-TTCTGCTGCTCATTGCTGTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAACAGCAATGAGCAGCAGAACTCGAGTTCTGCTGCTCATTGCTGTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAACAGCAATGAGCAGCAGAACTCGAGTTCTGCTGCTCATTGCTGTTG-3'

Other clones with same target sequence:

(none)