Construct: shRNA TRCN0000055027

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_013646.1-232s1c1
DNA Barcode:
GTGGAGACAAATCGTCAGGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Rora (19883)
Gene Description:
RAR-related orphan receptor alpha
Transcript:
RefSeq NM_013646.1 (NON-CURRENT)
Match location:
Position 232 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000055027)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTGGAGACAAATCGTCAGGAA
Hairpin Sequence:
5'-CCGG-GTGGAGACAAATCGTCAGGAA-CTCGAG-TTCCTGACGATTTGTCTCCAC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTGGAGACAAATCGTCAGGAACTCGAGTTCCTGACGATTTGTCTCCACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTGGAGACAAATCGTCAGGAACTCGAGTTCCTGACGATTTGTCTCCAC-3'

Other clones with same target sequence:

(none)