Construct: shRNA TRCN0000055090

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_008363.1-1852s1c1
DNA Barcode:
AGCCTCTAGTAGTGACCACAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Irak1 (16179)
Gene Description:
interleukin-1 receptor-associated kinase 1
Transcript:
RefSeq NM_008363.1 (NON-CURRENT)
Match location:
Position 1852 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000055090)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGCCTCTAGTAGTGACCACAA
Hairpin Sequence:
5'-CCGG-AGCCTCTAGTAGTGACCACAA-CTCGAG-TTGTGGTCACTACTAGAGGCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGCCTCTAGTAGTGACCACAACTCGAGTTGTGGTCACTACTAGAGGCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGCCTCTAGTAGTGACCACAACTCGAGTTGTGGTCACTACTAGAGGCT-3'

Other clones with same target sequence:

(none)