Construct: shRNA TRCN0000055294

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009330.1-1290s1c1
DNA Barcode:
GCAATCTCAGAACCTCATCAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hnf1b (21410)
Gene Description:
HNF1 homeobox B
Transcript:
RefSeq NM_009330.1 (NON-CURRENT)
Match location:
Position 1290 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000055294)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAATCTCAGAACCTCATCAT
Hairpin Sequence:
5'-CCGG-GCAATCTCAGAACCTCATCAT-CTCGAG-ATGATGAGGTTCTGAGATTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAATCTCAGAACCTCATCATCTCGAGATGATGAGGTTCTGAGATTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAATCTCAGAACCTCATCATCTCGAGATGATGAGGTTCTGAGATTGC-3'

Other clones with same target sequence:

(none)