Construct: shRNA TRCN0000055662

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004063.2-2082s1c1
DNA Barcode:
CCTGATCCTTATGGATGTGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CDH17 (1015)
Gene Description:
cadherin 17
Transcript:
RefSeq NM_004063.2 (NON-CURRENT)
Match location:
Position 2082 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000055662)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTGATCCTTATGGATGTGAA
Hairpin Sequence:
5'-CCGG-CCTGATCCTTATGGATGTGAA-CTCGAG-TTCACATCCATAAGGATCAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTGATCCTTATGGATGTGAACTCGAGTTCACATCCATAAGGATCAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTGATCCTTATGGATGTGAACTCGAGTTCACATCCATAAGGATCAGG-3'

Other clones with same target sequence:

(none)