Construct: shRNA TRCN0000056366

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002149.2-428s1c1
DNA Barcode:
GAACACGGAGTTCACCGACCA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HPCAL1 (3241)
Gene Description:
hippocalcin like 1
Transcript:
RefSeq NM_002149.2 (NON-CURRENT)
Match location:
Position 428 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000056366)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAACACGGAGTTCACCGACCA
Hairpin Sequence:
5'-CCGG-GAACACGGAGTTCACCGACCA-CTCGAG-TGGTCGGTGAACTCCGTGTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAACACGGAGTTCACCGACCACTCGAGTGGTCGGTGAACTCCGTGTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAACACGGAGTTCACCGACCACTCGAGTGGTCGGTGAACTCCGTGTTC-3'

Other clones with same target sequence:

  1. TRCN0000363583