Construct: shRNA TRCN0000056393

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_018924.2-2388s1c1
DNA Barcode:
GCCTTCTAATTCAGGCAATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PCDHGB3 (56102)
Gene Description:
protocadherin gamma subfamily B, 3
Transcript:
RefSeq NM_018924.2 (NON-CURRENT)
Match location:
Position 2388 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000056393)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTCTAATTCAGGCAATTT
Hairpin Sequence:
5'-CCGG-GCCTTCTAATTCAGGCAATTT-CTCGAG-AAATTGCCTGAATTAGAAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTCTAATTCAGGCAATTTCTCGAGAAATTGCCTGAATTAGAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTCTAATTCAGGCAATTTCTCGAGAAATTGCCTGAATTAGAAGGC-3'

Other clones with same target sequence:

(none)