Construct: shRNA TRCN0000056856

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003693.2-2165s1c1
DNA Barcode:
CCGCTCTGTCTTCCGCCATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SCARF1 (8578)
Gene Description:
scavenger receptor class F member 1
Transcript:
RefSeq NM_003693.2 (NON-CURRENT)
Match location:
Position 2165 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000056856)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGCTCTGTCTTCCGCCATTT
Hairpin Sequence:
5'-CCGG-CCGCTCTGTCTTCCGCCATTT-CTCGAG-AAATGGCGGAAGACAGAGCGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGCTCTGTCTTCCGCCATTTCTCGAGAAATGGCGGAAGACAGAGCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGCTCTGTCTTCCGCCATTTCTCGAGAAATGGCGGAAGACAGAGCGG-3'

Other clones with same target sequence:

(none)