Construct: shRNA TRCN0000057740

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002207.2-486s1c1
DNA Barcode:
CGCTGGAAGAACATCTACTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ITGA9 (3680)
Gene Description:
integrin subunit alpha 9
Transcript:
RefSeq NM_002207.2 (NON-CURRENT)
Match location:
Position 486 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000057740)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGCTGGAAGAACATCTACTAT
Hairpin Sequence:
5'-CCGG-CGCTGGAAGAACATCTACTAT-CTCGAG-ATAGTAGATGTTCTTCCAGCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGCTGGAAGAACATCTACTATCTCGAGATAGTAGATGTTCTTCCAGCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGCTGGAAGAACATCTACTATCTCGAGATAGTAGATGTTCTTCCAGCG-3'

Other clones with same target sequence:

(none)