Construct: shRNA TRCN0000060690

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005814.1-1236s1c1
DNA Barcode:
GAGGATGACTACAGGCAAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
GPA33 (10223)
Gene Description:
glycoprotein A33
Transcript:
RefSeq NM_005814.1 (NON-CURRENT)
Match location:
Position 1236 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000060690)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGGATGACTACAGGCAAGAA
Hairpin Sequence:
5'-CCGG-GAGGATGACTACAGGCAAGAA-CTCGAG-TTCTTGCCTGTAGTCATCCTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGGATGACTACAGGCAAGAACTCGAGTTCTTGCCTGTAGTCATCCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGGATGACTACAGGCAAGAACTCGAGTTCTTGCCTGTAGTCATCCTC-3'

Other clones with same target sequence:

(none)