Construct: shRNA TRCN0000062914
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_024295.3-461s1c1
- DNA Barcode:
- GCCAGCAGACTATTTATTCAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- DERL1 (79139)
- Gene Description:
- derlin 1
- Transcript:
- RefSeq NM_024295.3 (NON-CURRENT)
- Match location:
- Position 461 (CDS)
Vector Information:
- Vector Backbone:
- pLKO.1
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000062914)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCAGCAGACTATTTATTCAT
- Hairpin Sequence:
-
5'-CCGG-GCCAGCAGACTATTTATTCAT-CTCGAG-ATGAATAAATAGTCTGCTGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCAGCAGACTATTTATTCATCTCGAGATGAATAAATAGTCTGCTGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCAGCAGACTATTTATTCATCTCGAGATGAATAAATAGTCTGCTGGC-3'
Other clones with same target sequence:
-
TRCN0000300929
