Construct: shRNA TRCN0000062934

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002855.3-1057s1c1
DNA Barcode:
CCAGAACAGAACCCTCTTCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NECTIN1 (5818)
Gene Description:
nectin cell adhesion molecule 1
Transcript:
RefSeq NM_002855.3 (NON-CURRENT)
Match location:
Position 1057 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000062934)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAGAACAGAACCCTCTTCTT
Hairpin Sequence:
5'-CCGG-CCAGAACAGAACCCTCTTCTT-CTCGAG-AAGAAGAGGGTTCTGTTCTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAGAACAGAACCCTCTTCTTCTCGAGAAGAAGAGGGTTCTGTTCTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAGAACAGAACCCTCTTCTTCTCGAGAAGAAGAGGGTTCTGTTCTGG-3'

Other clones with same target sequence:

(none)