Construct: shRNA TRCN0000062949

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003105.3-5229s1c1
DNA Barcode:
GCTGCTAGTAACTTTACAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SORL1 (6653)
Gene Description:
sortilin related receptor 1
Transcript:
RefSeq NM_003105.3 (NON-CURRENT)
Match location:
Position 5229 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000062949)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTGCTAGTAACTTTACAGAA
Hairpin Sequence:
5'-CCGG-GCTGCTAGTAACTTTACAGAA-CTCGAG-TTCTGTAAAGTTACTAGCAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTGCTAGTAACTTTACAGAACTCGAGTTCTGTAAAGTTACTAGCAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTGCTAGTAACTTTACAGAACTCGAGTTCTGTAAAGTTACTAGCAGC-3'

Other clones with same target sequence:

(none)