Construct: shRNA TRCN0000063252

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_006801.2-640s1c1
DNA Barcode:
AGCCACTACTTGTTTGCGCTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
KDELR1 (10945)
Gene Description:
KDEL endoplasmic reticulum protein retention receptor 1
Transcript:
RefSeq NM_006801.2 (NON-CURRENT)
Match location:
Position 640 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000063252)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGCCACTACTTGTTTGCGCTA
Hairpin Sequence:
5'-CCGG-AGCCACTACTTGTTTGCGCTA-CTCGAG-TAGCGCAAACAAGTAGTGGCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGCCACTACTTGTTTGCGCTACTCGAGTAGCGCAAACAAGTAGTGGCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGCCACTACTTGTTTGCGCTACTCGAGTAGCGCAAACAAGTAGTGGCT-3'

Other clones with same target sequence:

(none)