Construct: shRNA TRCN0000063519

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_182926.1-864s1c1
DNA Barcode:
CCCTTATTCATGCAACTACTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
KTN1 (3895)
Gene Description:
kinectin 1
Transcript:
RefSeq NM_182926.1 (NON-CURRENT)
Match location:
Position 864 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000063519)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCTTATTCATGCAACTACTT
Hairpin Sequence:
5'-CCGG-CCCTTATTCATGCAACTACTT-CTCGAG-AAGTAGTTGCATGAATAAGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCTTATTCATGCAACTACTTCTCGAGAAGTAGTTGCATGAATAAGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCTTATTCATGCAACTACTTCTCGAGAAGTAGTTGCATGAATAAGGG-3'

Other clones with same target sequence:

  1. TRCN0000300981