Construct: shRNA TRCN0000063989

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001389.3-6143s1c1
DNA Barcode:
CCTCATACATTTGCCTCCATA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
DSCAM (1826)
Gene Description:
DS cell adhesion molecule
Transcript:
RefSeq NM_001389.3 (NON-CURRENT)
Match location:
Position 6143 (CDS)

Vector Information:

Vector Backbone:
pLKO.1
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000063989)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCATACATTTGCCTCCATA
Hairpin Sequence:
5'-CCGG-CCTCATACATTTGCCTCCATA-CTCGAG-TATGGAGGCAAATGTATGAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCATACATTTGCCTCCATACTCGAGTATGGAGGCAAATGTATGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCATACATTTGCCTCCATACTCGAGTATGGAGGCAAATGTATGAGG-3'

Other clones with same target sequence:

(none)